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matlab version 8.4  (MathWorks Inc)


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    MathWorks Inc matlab version 8.4
    Matlab Version 8.4, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/matlab+version+8%2E4/pmc12157990-35-6-9
    Average 90 stars, based on 1 article reviews
    matlab version 8.4 - by Bioz Stars, 2026-09
    90/100 stars

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    Fluorescence:

    Article Title: The Effect of Transient Location on the Resolution of Bistable Visual and Audiovisual Motion Sequences.
    Article Snippet: We examined the attention and inference accounts of audiovisual perception using the stream/ bounce display, a visual stimulus wherein two identical objects move toward each other, completely superimpose, then move apart.. This display has two candidate percepts: stream past each other or bounce off each other.. Presented without additional visual or auditory transients, the motion sequence tends to yield the streaming percept, but when coupled with a tone or flash at the point of coincidence, the response bias flips toward bouncing.

    Article Title: Factors structuring phytoplankton community in a large tropical river: Case study in the Red River (Vietnam)
    Article Snippet: Algal assemblages have been widely used as an ecological indicator of aquatic ecosystem health conditions because of their specific sensitivity to a wide variety of environmental conditions.. In turbid rivers, as in other aquatic systems, phytoplankton structure plays an important role in structuring aquatic food webs.. Worldwide, phytoplankton is less studied in turbid, large tropical rivers compared to temperate river systems.

    Article Title: Feasibility of Voltage-Applied SERS Measurement of Bile Juice as an Effective Analytical Scheme to Enhance Discrimination between Gall Bladder (GB) Polyp and GB Cancer.
    Article Snippet: Subscriber access provided by Uppsala universitetsbibliotek is published by the American Chemical Society.. 1155 Sixteenth Street N.W., Washington, DC 20036 Published by American Chemical Society.. Copyright © American Chemical Society.

    Article Title: Detection of Carbon Nanotubes in Bovine Raw Milk Through Fourier Transform-Raman Spectroscopy.
    Article Snippet: The PLS-DA model was built using MATLAB version 8.4 (MathWorks, Natick, USA) and PLS Toolbox version 7.0 (Eigenvector Technologies, Manson, USA).

    Article Title: The structure of diatom communities constrains biogeochemical properties in surface waters of the Southern Ocean (Kerguelen Plateau)
    Article Snippet: Multivariate analyses were performed on total diatom abundances (i. e. including both intact and detrital cell counts) using MATLAB, version 8.4 (MathWorks).

    Article Title: Immune response characterization of endometrial cancer
    Article Snippet: Statistical analyses were performed using the following scientific software: Matlab version 8.4 (MathWorks, Inc., Natick, MA), SPSS version 18 (SPSS Inc., Chicago, IL), and GraphPad Prism, version 6 (GraphPad Software, Inc., La Jolla, CA).

    Article Title: Heterozygous frameshift variants in HNRNPA2B1 cause early-onset oculopharyngeal muscular dystrophy
    Article Snippet: Fluorescence polarization analysis was performed using MATLAB (Version 8.4).

    Article Title: Endogenous γ-Secretase Is Linked to Phagocytic Activity in Microglial Cells
    Article Snippet: Pseudo-colored FRET images were generated using MATLAB version 8.4 (MathWorks, Natick, MA, USA). pHrodoTM Red E. coli BioParticlesTM was excited by a laser at 561 nm, and emission was detected within 580–660 nm.

    Marker:

    Article Title: The Effect of Transient Location on the Resolution of Bistable Visual and Audiovisual Motion Sequences.
    Article Snippet: We examined the attention and inference accounts of audiovisual perception using the stream/ bounce display, a visual stimulus wherein two identical objects move toward each other, completely superimpose, then move apart.. This display has two candidate percepts: stream past each other or bounce off each other.. Presented without additional visual or auditory transients, the motion sequence tends to yield the streaming percept, but when coupled with a tone or flash at the point of coincidence, the response bias flips toward bouncing.

    Article Title: Factors structuring phytoplankton community in a large tropical river: Case study in the Red River (Vietnam)
    Article Snippet: Algal assemblages have been widely used as an ecological indicator of aquatic ecosystem health conditions because of their specific sensitivity to a wide variety of environmental conditions.. In turbid rivers, as in other aquatic systems, phytoplankton structure plays an important role in structuring aquatic food webs.. Worldwide, phytoplankton is less studied in turbid, large tropical rivers compared to temperate river systems.

    Article Title: Feasibility of Voltage-Applied SERS Measurement of Bile Juice as an Effective Analytical Scheme to Enhance Discrimination between Gall Bladder (GB) Polyp and GB Cancer.
    Article Snippet: Subscriber access provided by Uppsala universitetsbibliotek is published by the American Chemical Society.. 1155 Sixteenth Street N.W., Washington, DC 20036 Published by American Chemical Society.. Copyright © American Chemical Society.

    Article Title: Detection of Carbon Nanotubes in Bovine Raw Milk Through Fourier Transform-Raman Spectroscopy.
    Article Snippet: The PLS-DA model was built using MATLAB version 8.4 (MathWorks, Natick, USA) and PLS Toolbox version 7.0 (Eigenvector Technologies, Manson, USA).

    Article Title: The structure of diatom communities constrains biogeochemical properties in surface waters of the Southern Ocean (Kerguelen Plateau)
    Article Snippet: Multivariate analyses were performed on total diatom abundances (i. e. including both intact and detrital cell counts) using MATLAB, version 8.4 (MathWorks).

    Article Title: Immune response characterization of endometrial cancer
    Article Snippet: Statistical analyses were performed using the following scientific software: Matlab version 8.4 (MathWorks, Inc., Natick, MA), SPSS version 18 (SPSS Inc., Chicago, IL), and GraphPad Prism, version 6 (GraphPad Software, Inc., La Jolla, CA).

    Article Title: Heterozygous frameshift variants in HNRNPA2B1 cause early-onset oculopharyngeal muscular dystrophy
    Article Snippet: Fluorescence polarization analysis was performed using MATLAB (Version 8.4).

    Article Title: Endogenous γ-Secretase Is Linked to Phagocytic Activity in Microglial Cells
    Article Snippet: Pseudo-colored FRET images were generated using MATLAB version 8.4 (MathWorks, Natick, MA, USA). pHrodoTM Red E. coli BioParticlesTM was excited by a laser at 561 nm, and emission was detected within 580–660 nm.

    Labeling:

    Article Title: The Effect of Transient Location on the Resolution of Bistable Visual and Audiovisual Motion Sequences.
    Article Snippet: We examined the attention and inference accounts of audiovisual perception using the stream/ bounce display, a visual stimulus wherein two identical objects move toward each other, completely superimpose, then move apart.. This display has two candidate percepts: stream past each other or bounce off each other.. Presented without additional visual or auditory transients, the motion sequence tends to yield the streaming percept, but when coupled with a tone or flash at the point of coincidence, the response bias flips toward bouncing.

    Article Title: Factors structuring phytoplankton community in a large tropical river: Case study in the Red River (Vietnam)
    Article Snippet: Algal assemblages have been widely used as an ecological indicator of aquatic ecosystem health conditions because of their specific sensitivity to a wide variety of environmental conditions.. In turbid rivers, as in other aquatic systems, phytoplankton structure plays an important role in structuring aquatic food webs.. Worldwide, phytoplankton is less studied in turbid, large tropical rivers compared to temperate river systems.

    Article Title: Feasibility of Voltage-Applied SERS Measurement of Bile Juice as an Effective Analytical Scheme to Enhance Discrimination between Gall Bladder (GB) Polyp and GB Cancer.
    Article Snippet: Subscriber access provided by Uppsala universitetsbibliotek is published by the American Chemical Society.. 1155 Sixteenth Street N.W., Washington, DC 20036 Published by American Chemical Society.. Copyright © American Chemical Society.

    Article Title: Detection of Carbon Nanotubes in Bovine Raw Milk Through Fourier Transform-Raman Spectroscopy.
    Article Snippet: The PLS-DA model was built using MATLAB version 8.4 (MathWorks, Natick, USA) and PLS Toolbox version 7.0 (Eigenvector Technologies, Manson, USA).

    Article Title: The structure of diatom communities constrains biogeochemical properties in surface waters of the Southern Ocean (Kerguelen Plateau)
    Article Snippet: Multivariate analyses were performed on total diatom abundances (i. e. including both intact and detrital cell counts) using MATLAB, version 8.4 (MathWorks).

    Article Title: Immune response characterization of endometrial cancer
    Article Snippet: Statistical analyses were performed using the following scientific software: Matlab version 8.4 (MathWorks, Inc., Natick, MA), SPSS version 18 (SPSS Inc., Chicago, IL), and GraphPad Prism, version 6 (GraphPad Software, Inc., La Jolla, CA).

    Article Title: Heterozygous frameshift variants in HNRNPA2B1 cause early-onset oculopharyngeal muscular dystrophy
    Article Snippet: Fluorescence polarization analysis was performed using MATLAB (Version 8.4).

    Article Title: Endogenous γ-Secretase Is Linked to Phagocytic Activity in Microglial Cells
    Article Snippet: Pseudo-colored FRET images were generated using MATLAB version 8.4 (MathWorks, Natick, MA, USA). pHrodoTM Red E. coli BioParticlesTM was excited by a laser at 561 nm, and emission was detected within 580–660 nm.



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    (A) OXER1 phylogenetic tree. (B) Relative expression levels of hcar1–3 and hcar1–4 mRNA in leukocytes compared with the rest of the body determined by FACS-sorting of dissociated neutrophil (left panel, TG( lyz :pm2-mk2)) or macrophage (right panel, TG( mpeg1: eGFP )) reporter zebrafish larvae and qRT-PCR. Error bars, SD of three different pools of zebrafish leukocytes. *p < 0.05, **p < 0.01, ***p < 0.001, n.s., p > 0.05; Student’s t test (two tailed, two sample unequal variance test). (C) Top left panel: experimental cartoon scheme. This figure was created with BioRender. Bottom left panel: Venn diagram of zebrafish genes with ENSEMBL orthologs (ENSEMBL release 107) in human, cat, mouse, and rat. Red number, number of DIOPT-filtered NRNM genes (see ). Right panel: sorted sGCA heatmap of significantly regulated mRNA-seq expression profiles (fold-regulation > 2, p adj < 0.05 by Benjamini and Hochberg method) with high similarity to the respective binary expression phenotypes (correlation distance < 0.25, , also see and <t>MATLAB</t> sGCA script). Color scale, mRNA-seq profiles are row-scaled between 0 (blue) and 1 (pink). Shown are three biological replicates per experimental condition. Heatmap inset: significant (p adj < 0.05) fold-upregulation of select inflammatory receptor mRNAs 2 and 4 h after PA infection as calculated by DEseq2. DIOPT-filtered NRNM genes are marked on the left side of the heatmap (zebrafish gene/human ortholog). NRNM genes with “high”-ranked (criteria see ) human orthologs are printed in bold. (D) Heatmap of row-scaled lipid concentrations as measured by LIPIDMAPS full panel eicosanoid mass spectroscopical analysis. Color scale, relative lipid concentrations are row-scaled between 0 (blue) and 1 (orange). Boxed numbers, absolute lipid concentrations in pmol/mg tissue (~μM). Note that the color scale does not represent these absolute lipid concentrations, but that it highlights the relative changes for each lipid. Shown are three biological replicates (i.e., ~400 3 dpf zebrafish larvae per pool) per experimental condition. Numbers right of heatmap, p values of Student’s t test (two tailed, two sample unequal variance test) comparing 0 h PA vs. 2 h PA. See also and and .
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    (A) OXER1 phylogenetic tree. (B) Relative expression levels of hcar1–3 and hcar1–4 mRNA in leukocytes compared with the rest of the body determined by FACS-sorting of dissociated neutrophil (left panel, TG( lyz :pm2-mk2)) or macrophage (right panel, TG( mpeg1: eGFP )) reporter zebrafish larvae and qRT-PCR. Error bars, SD of three different pools of zebrafish leukocytes. *p < 0.05, **p < 0.01, ***p < 0.001, n.s., p > 0.05; Student’s t test (two tailed, two sample unequal variance test). (C) Top left panel: experimental cartoon scheme. This figure was created with BioRender. Bottom left panel: Venn diagram of zebrafish genes with ENSEMBL orthologs (ENSEMBL release 107) in human, cat, mouse, and rat. Red number, number of DIOPT-filtered NRNM genes (see ). Right panel: sorted sGCA heatmap of significantly regulated mRNA-seq expression profiles (fold-regulation > 2, p adj < 0.05 by Benjamini and Hochberg method) with high similarity to the respective binary expression phenotypes (correlation distance < 0.25, , also see and <t>MATLAB</t> sGCA script). Color scale, mRNA-seq profiles are row-scaled between 0 (blue) and 1 (pink). Shown are three biological replicates per experimental condition. Heatmap inset: significant (p adj < 0.05) fold-upregulation of select inflammatory receptor mRNAs 2 and 4 h after PA infection as calculated by DEseq2. DIOPT-filtered NRNM genes are marked on the left side of the heatmap (zebrafish gene/human ortholog). NRNM genes with “high”-ranked (criteria see ) human orthologs are printed in bold. (D) Heatmap of row-scaled lipid concentrations as measured by LIPIDMAPS full panel eicosanoid mass spectroscopical analysis. Color scale, relative lipid concentrations are row-scaled between 0 (blue) and 1 (orange). Boxed numbers, absolute lipid concentrations in pmol/mg tissue (~μM). Note that the color scale does not represent these absolute lipid concentrations, but that it highlights the relative changes for each lipid. Shown are three biological replicates (i.e., ~400 3 dpf zebrafish larvae per pool) per experimental condition. Numbers right of heatmap, p values of Student’s t test (two tailed, two sample unequal variance test) comparing 0 h PA vs. 2 h PA. See also and and .
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    (A) OXER1 phylogenetic tree. (B) Relative expression levels of hcar1–3 and hcar1–4 mRNA in leukocytes compared with the rest of the body determined by FACS-sorting of dissociated neutrophil (left panel, TG( lyz :pm2-mk2)) or macrophage (right panel, TG( mpeg1: eGFP )) reporter zebrafish larvae and qRT-PCR. Error bars, SD of three different pools of zebrafish leukocytes. *p < 0.05, **p < 0.01, ***p < 0.001, n.s., p > 0.05; Student’s t test (two tailed, two sample unequal variance test). (C) Top left panel: experimental cartoon scheme. This figure was created with BioRender. Bottom left panel: Venn diagram of zebrafish genes with ENSEMBL orthologs (ENSEMBL release 107) in human, cat, mouse, and rat. Red number, number of DIOPT-filtered NRNM genes (see ). Right panel: sorted sGCA heatmap of significantly regulated mRNA-seq expression profiles (fold-regulation > 2, p adj < 0.05 by Benjamini and Hochberg method) with high similarity to the respective binary expression phenotypes (correlation distance < 0.25, , also see and <t>MATLAB</t> sGCA script). Color scale, mRNA-seq profiles are row-scaled between 0 (blue) and 1 (pink). Shown are three biological replicates per experimental condition. Heatmap inset: significant (p adj < 0.05) fold-upregulation of select inflammatory receptor mRNAs 2 and 4 h after PA infection as calculated by DEseq2. DIOPT-filtered NRNM genes are marked on the left side of the heatmap (zebrafish gene/human ortholog). NRNM genes with “high”-ranked (criteria see ) human orthologs are printed in bold. (D) Heatmap of row-scaled lipid concentrations as measured by LIPIDMAPS full panel eicosanoid mass spectroscopical analysis. Color scale, relative lipid concentrations are row-scaled between 0 (blue) and 1 (orange). Boxed numbers, absolute lipid concentrations in pmol/mg tissue (~μM). Note that the color scale does not represent these absolute lipid concentrations, but that it highlights the relative changes for each lipid. Shown are three biological replicates (i.e., ~400 3 dpf zebrafish larvae per pool) per experimental condition. Numbers right of heatmap, p values of Student’s t test (two tailed, two sample unequal variance test) comparing 0 h PA vs. 2 h PA. See also and and .
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    Image Search Results


    Journal: Cell reports

    Article Title: Oxoeicosanoid signaling mediates early antimicrobial defense in zebrafish

    doi: 10.1016/j.celrep.2022.111974

    Figure Lengend Snippet:

    Article Snippet: MATLAB Compiler Version 8.4 (R2022a) , Mathworks Inc., USA , http://mathworks.com.

    Techniques: Recombinant, Software, Imaging, Microscopy

    (A) OXER1 phylogenetic tree. (B) Relative expression levels of hcar1–3 and hcar1–4 mRNA in leukocytes compared with the rest of the body determined by FACS-sorting of dissociated neutrophil (left panel, TG( lyz :pm2-mk2)) or macrophage (right panel, TG( mpeg1: eGFP )) reporter zebrafish larvae and qRT-PCR. Error bars, SD of three different pools of zebrafish leukocytes. *p < 0.05, **p < 0.01, ***p < 0.001, n.s., p > 0.05; Student’s t test (two tailed, two sample unequal variance test). (C) Top left panel: experimental cartoon scheme. This figure was created with BioRender. Bottom left panel: Venn diagram of zebrafish genes with ENSEMBL orthologs (ENSEMBL release 107) in human, cat, mouse, and rat. Red number, number of DIOPT-filtered NRNM genes (see ). Right panel: sorted sGCA heatmap of significantly regulated mRNA-seq expression profiles (fold-regulation > 2, p adj < 0.05 by Benjamini and Hochberg method) with high similarity to the respective binary expression phenotypes (correlation distance < 0.25, , also see and MATLAB sGCA script). Color scale, mRNA-seq profiles are row-scaled between 0 (blue) and 1 (pink). Shown are three biological replicates per experimental condition. Heatmap inset: significant (p adj < 0.05) fold-upregulation of select inflammatory receptor mRNAs 2 and 4 h after PA infection as calculated by DEseq2. DIOPT-filtered NRNM genes are marked on the left side of the heatmap (zebrafish gene/human ortholog). NRNM genes with “high”-ranked (criteria see ) human orthologs are printed in bold. (D) Heatmap of row-scaled lipid concentrations as measured by LIPIDMAPS full panel eicosanoid mass spectroscopical analysis. Color scale, relative lipid concentrations are row-scaled between 0 (blue) and 1 (orange). Boxed numbers, absolute lipid concentrations in pmol/mg tissue (~μM). Note that the color scale does not represent these absolute lipid concentrations, but that it highlights the relative changes for each lipid. Shown are three biological replicates (i.e., ~400 3 dpf zebrafish larvae per pool) per experimental condition. Numbers right of heatmap, p values of Student’s t test (two tailed, two sample unequal variance test) comparing 0 h PA vs. 2 h PA. See also and and .

    Journal: Cell reports

    Article Title: Oxoeicosanoid signaling mediates early antimicrobial defense in zebrafish

    doi: 10.1016/j.celrep.2022.111974

    Figure Lengend Snippet: (A) OXER1 phylogenetic tree. (B) Relative expression levels of hcar1–3 and hcar1–4 mRNA in leukocytes compared with the rest of the body determined by FACS-sorting of dissociated neutrophil (left panel, TG( lyz :pm2-mk2)) or macrophage (right panel, TG( mpeg1: eGFP )) reporter zebrafish larvae and qRT-PCR. Error bars, SD of three different pools of zebrafish leukocytes. *p < 0.05, **p < 0.01, ***p < 0.001, n.s., p > 0.05; Student’s t test (two tailed, two sample unequal variance test). (C) Top left panel: experimental cartoon scheme. This figure was created with BioRender. Bottom left panel: Venn diagram of zebrafish genes with ENSEMBL orthologs (ENSEMBL release 107) in human, cat, mouse, and rat. Red number, number of DIOPT-filtered NRNM genes (see ). Right panel: sorted sGCA heatmap of significantly regulated mRNA-seq expression profiles (fold-regulation > 2, p adj < 0.05 by Benjamini and Hochberg method) with high similarity to the respective binary expression phenotypes (correlation distance < 0.25, , also see and MATLAB sGCA script). Color scale, mRNA-seq profiles are row-scaled between 0 (blue) and 1 (pink). Shown are three biological replicates per experimental condition. Heatmap inset: significant (p adj < 0.05) fold-upregulation of select inflammatory receptor mRNAs 2 and 4 h after PA infection as calculated by DEseq2. DIOPT-filtered NRNM genes are marked on the left side of the heatmap (zebrafish gene/human ortholog). NRNM genes with “high”-ranked (criteria see ) human orthologs are printed in bold. (D) Heatmap of row-scaled lipid concentrations as measured by LIPIDMAPS full panel eicosanoid mass spectroscopical analysis. Color scale, relative lipid concentrations are row-scaled between 0 (blue) and 1 (orange). Boxed numbers, absolute lipid concentrations in pmol/mg tissue (~μM). Note that the color scale does not represent these absolute lipid concentrations, but that it highlights the relative changes for each lipid. Shown are three biological replicates (i.e., ~400 3 dpf zebrafish larvae per pool) per experimental condition. Numbers right of heatmap, p values of Student’s t test (two tailed, two sample unequal variance test) comparing 0 h PA vs. 2 h PA. See also and and .

    Article Snippet: MATLAB Compiler Version 8.4 (R2022a) , Mathworks Inc., USA , http://mathworks.com.

    Techniques: Expressing, Quantitative RT-PCR, Two Tailed Test, Infection

    Journal: Cell reports

    Article Title: Oxoeicosanoid signaling mediates early antimicrobial defense in zebrafish

    doi: 10.1016/j.celrep.2022.111974

    Figure Lengend Snippet:

    Article Snippet: MATLAB Compiler Version 8.4 (R2022a) , Mathworks Inc., USA , http://mathworks.com.

    Techniques: Virus, Recombinant, Saline, cDNA Synthesis, Software, Imaging, Microscopy